Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarce1O54941 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarce1O54941 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarce1O54941 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarce1O54941 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smarce1O54941 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarce1O54941 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarce1O54941 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Smarce1O54941 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.42■□□□□ 0.86
Smarce1O54941 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.42■□□□□ 0.86
Smarce1O54941 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.42■□□□□ 0.86
Smarce1O54941 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.42■□□□□ 0.86
Smarce1O54941 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.42■□□□□ 0.86
Smarce1O54941 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarce1O54941 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarce1O54941 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smarce1O54941 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarce1O54941 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarce1O54941 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarce1O54941 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarce1O54941 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.41■□□□□ 0.86
Smarce1O54941 Gm12896-201ENSMUST00000118430 226 ntBASIC20.41■□□□□ 0.86
Smarce1O54941 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Smarce1O54941 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Smarce1O54941 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarce1O54941 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarce1O54941 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.41■□□□□ 0.86
Smarce1O54941 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Smarce1O54941 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarce1O54941 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarce1O54941 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarce1O54941 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarce1O54941 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarce1O54941 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarce1O54941 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarce1O54941 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.4■□□□□ 0.86
Smarce1O54941 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarce1O54941 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarce1O54941 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Smarce1O54941 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarce1O54941 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarce1O54941 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Smarce1O54941 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.39■□□□□ 0.86
Smarce1O54941 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarce1O54941 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.39■□□□□ 0.86
Smarce1O54941 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Smarce1O54941 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Smarce1O54941 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Smarce1O54941 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarce1O54941 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarce1O54941 Gm11249-201ENSMUST00000117071 859 ntBASIC20.39■□□□□ 0.85
Smarce1O54941 Gm13216-201ENSMUST00000117145 591 ntBASIC20.39■□□□□ 0.85
Smarce1O54941 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.39■□□□□ 0.85
Smarce1O54941 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.39■□□□□ 0.85
Smarce1O54941 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarce1O54941 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarce1O54941 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.39■□□□□ 0.85
Smarce1O54941 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Smarce1O54941 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smarce1O54941 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarce1O54941 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarce1O54941 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarce1O54941 Gm13158-201ENSMUST00000122007 736 ntBASIC20.38■□□□□ 0.85
Smarce1O54941 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.38■□□□□ 0.85
Smarce1O54941 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.38■□□□□ 0.85
Smarce1O54941 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarce1O54941 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarce1O54941 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smarce1O54941 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarce1O54941 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.38■□□□□ 0.85
Smarce1O54941 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarce1O54941 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Smarce1O54941 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarce1O54941 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarce1O54941 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarce1O54941 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.37■□□□□ 0.85
Smarce1O54941 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smarce1O54941 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarce1O54941 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Smarce1O54941 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smarce1O54941 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarce1O54941 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Smarce1O54941 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarce1O54941 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarce1O54941 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarce1O54941 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarce1O54941 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.36■□□□□ 0.85
Smarce1O54941 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smarce1O54941 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.36■□□□□ 0.85
Smarce1O54941 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms