Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ChkaO54804 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ChkaO54804 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ChkaO54804 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ChkaO54804 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ChkaO54804 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ChkaO54804 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ChkaO54804 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ChkaO54804 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ChkaO54804 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ChkaO54804 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ChkaO54804 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ChkaO54804 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ChkaO54804 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.33■□□□□ 0.36
ChkaO54804 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ChkaO54804 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ChkaO54804 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.32■□□□□ 0.36
ChkaO54804 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ChkaO54804 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ChkaO54804 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Gm10653-202ENSMUST00000139570 835 ntBASIC17.32■□□□□ 0.36
ChkaO54804 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.32■□□□□ 0.36
ChkaO54804 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.32■□□□□ 0.36
ChkaO54804 Gm4974-201ENSMUST00000209974 875 ntBASIC17.32■□□□□ 0.36
ChkaO54804 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ChkaO54804 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.32■□□□□ 0.36
ChkaO54804 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ChkaO54804 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
ChkaO54804 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.32■□□□□ 0.36
ChkaO54804 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ChkaO54804 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.32■□□□□ 0.36
ChkaO54804 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ChkaO54804 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ChkaO54804 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChkaO54804 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChkaO54804 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChkaO54804 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ChkaO54804 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.31■□□□□ 0.36
ChkaO54804 Gm12382-201ENSMUST00000122005 922 ntBASIC17.31■□□□□ 0.36
ChkaO54804 Gm10517-202ENSMUST00000192970 758 ntBASIC17.31■□□□□ 0.36
ChkaO54804 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.31■□□□□ 0.36
ChkaO54804 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.31■□□□□ 0.36
ChkaO54804 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChkaO54804 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChkaO54804 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChkaO54804 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ChkaO54804 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChkaO54804 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ChkaO54804 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.31■□□□□ 0.36
ChkaO54804 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.3■□□□□ 0.36
ChkaO54804 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ChkaO54804 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.3■□□□□ 0.36
ChkaO54804 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
ChkaO54804 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.29■□□□□ 0.36
ChkaO54804 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ChkaO54804 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Haglr-201ENSMUST00000100000 2085 ntBASIC17.29■□□□□ 0.36
ChkaO54804 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.29■□□□□ 0.36
ChkaO54804 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.29■□□□□ 0.36
ChkaO54804 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.29■□□□□ 0.36
ChkaO54804 Trmt13-210ENSMUST00000198454 880 ntBASIC17.29■□□□□ 0.36
ChkaO54804 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
ChkaO54804 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ChkaO54804 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms