Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1i3O35627 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.44■□□□□ 0.54
Nr1i3O35627 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1i3O35627 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nr1i3O35627 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1i3O35627 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nr1i3O35627 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nr1i3O35627 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nr1i3O35627 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1i3O35627 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1i3O35627 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1i3O35627 Gm12527-201ENSMUST00000117967 564 ntBASIC18.43■□□□□ 0.54
Nr1i3O35627 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Nr1i3O35627 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1i3O35627 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.43■□□□□ 0.54
Nr1i3O35627 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.43■□□□□ 0.54
Nr1i3O35627 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1i3O35627 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1i3O35627 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1i3O35627 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1i3O35627 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nr1i3O35627 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.42■□□□□ 0.54
Nr1i3O35627 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nr1i3O35627 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.42■□□□□ 0.54
Nr1i3O35627 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nr1i3O35627 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nr1i3O35627 Gm37025-201ENSMUST00000195159 829 ntBASIC18.42■□□□□ 0.54
Nr1i3O35627 Trmt13-210ENSMUST00000198454 880 ntBASIC18.42■□□□□ 0.54
Nr1i3O35627 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.42■□□□□ 0.54
Nr1i3O35627 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nr1i3O35627 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nr1i3O35627 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nr1i3O35627 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nr1i3O35627 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1i3O35627 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.41■□□□□ 0.54
Nr1i3O35627 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1i3O35627 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1i3O35627 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nr1i3O35627 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1i3O35627 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1i3O35627 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1i3O35627 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nr1i3O35627 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
Nr1i3O35627 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.4■□□□□ 0.54
Nr1i3O35627 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.4■□□□□ 0.54
Nr1i3O35627 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.4■□□□□ 0.54
Nr1i3O35627 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.4■□□□□ 0.54
Nr1i3O35627 Gm5643-201ENSMUST00000117081 966 ntBASIC18.4■□□□□ 0.54
Nr1i3O35627 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.4■□□□□ 0.54
Nr1i3O35627 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nr1i3O35627 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Nr1i3O35627 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Nr1i3O35627 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nr1i3O35627 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Nr1i3O35627 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.39■□□□□ 0.53
Nr1i3O35627 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nr1i3O35627 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nr1i3O35627 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nr1i3O35627 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Nr1i3O35627 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms