Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca4O35600 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Abca4O35600 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca4O35600 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.12■□□□□ 0.17
Abca4O35600 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.12■□□□□ 0.17
Abca4O35600 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Abca4O35600 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Abca4O35600 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Abca4O35600 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Abca4O35600 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Abca4O35600 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Abca4O35600 Golph3-205ENSMUST00000228671 2842 ntBASIC16.11■□□□□ 0.17
Abca4O35600 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Abca4O35600 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.11■□□□□ 0.17
Abca4O35600 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.11■□□□□ 0.17
Abca4O35600 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Abca4O35600 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Abca4O35600 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Abca4O35600 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Abca4O35600 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Abca4O35600 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.1■□□□□ 0.17
Abca4O35600 Gm13312-201ENSMUST00000119631 718 ntBASIC16.1■□□□□ 0.17
Abca4O35600 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.1■□□□□ 0.17
Abca4O35600 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Abca4O35600 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Abca4O35600 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Abca4O35600 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Abca4O35600 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.1■□□□□ 0.17
Abca4O35600 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Abca4O35600 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.09■□□□□ 0.17
Abca4O35600 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.09■□□□□ 0.17
Abca4O35600 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.09■□□□□ 0.17
Abca4O35600 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.09■□□□□ 0.17
Abca4O35600 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Abca4O35600 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Abca4O35600 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.09■□□□□ 0.17
Abca4O35600 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
Abca4O35600 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Abca4O35600 Gm25990-201ENSMUST00000102440 86 ntBASIC16.08■□□□□ 0.17
Abca4O35600 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Abca4O35600 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Abca4O35600 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.08■□□□□ 0.17
Abca4O35600 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.08■□□□□ 0.17
Abca4O35600 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.08■□□□□ 0.17
Abca4O35600 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Abca4O35600 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Abca4O35600 Phf7-203ENSMUST00000226565 1971 ntBASIC16.08■□□□□ 0.17
Abca4O35600 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Abca4O35600 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 AV026068-213ENSMUST00000223675 1171 ntBASIC16.08■□□□□ 0.16
Abca4O35600 Gm8396-201ENSMUST00000057361 823 ntBASIC16.08■□□□□ 0.16
Abca4O35600 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Abca4O35600 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Abca4O35600 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Abca4O35600 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms