Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clk4O35493 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.46■□□□□ 0.23
Clk4O35493 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.46■□□□□ 0.23
Clk4O35493 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.46■□□□□ 0.23
Clk4O35493 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.46■□□□□ 0.23
Clk4O35493 Timm23-208ENSMUST00000226683 750 ntBASIC16.46■□□□□ 0.23
Clk4O35493 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.46■□□□□ 0.23
Clk4O35493 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Clk4O35493 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Clk4O35493 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Clk4O35493 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clk4O35493 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clk4O35493 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clk4O35493 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clk4O35493 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clk4O35493 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clk4O35493 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clk4O35493 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clk4O35493 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Clk4O35493 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Clk4O35493 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.45■□□□□ 0.22
Clk4O35493 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.45■□□□□ 0.22
Clk4O35493 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clk4O35493 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.45■□□□□ 0.22
Clk4O35493 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.45■□□□□ 0.22
Clk4O35493 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.45■□□□□ 0.22
Clk4O35493 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Clk4O35493 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.45■□□□□ 0.22
Clk4O35493 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Clk4O35493 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Clk4O35493 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clk4O35493 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.44■□□□□ 0.22
Clk4O35493 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.44■□□□□ 0.22
Clk4O35493 Gm21814-202ENSMUST00000203277 873 ntBASIC16.44■□□□□ 0.22
Clk4O35493 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Clk4O35493 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.44■□□□□ 0.22
Clk4O35493 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Clk4O35493 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Clk4O35493 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.44■□□□□ 0.22
Clk4O35493 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clk4O35493 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.43■□□□□ 0.22
Clk4O35493 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.43■□□□□ 0.22
Clk4O35493 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.43■□□□□ 0.22
Clk4O35493 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Clk4O35493 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.43■□□□□ 0.22
Clk4O35493 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clk4O35493 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms