Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk3O35492 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk3O35492 Gm18666-201ENSMUST00000190039 958 ntBASIC16.34■□□□□ 0.21
Clk3O35492 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.34■□□□□ 0.21
Clk3O35492 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.34■□□□□ 0.21
Clk3O35492 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Clk3O35492 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk3O35492 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Clk3O35492 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk3O35492 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Clk3O35492 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clk3O35492 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk3O35492 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Clk3O35492 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk3O35492 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clk3O35492 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clk3O35492 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.33■□□□□ 0.21
Clk3O35492 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clk3O35492 Gm11249-201ENSMUST00000117071 859 ntBASIC16.33■□□□□ 0.2
Clk3O35492 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.33■□□□□ 0.2
Clk3O35492 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk3O35492 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clk3O35492 Gm10138-203ENSMUST00000206952 366 ntBASIC16.33■□□□□ 0.2
Clk3O35492 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk3O35492 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk3O35492 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clk3O35492 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clk3O35492 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk3O35492 Haglr-201ENSMUST00000100000 2085 ntBASIC16.33■□□□□ 0.2
Clk3O35492 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clk3O35492 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk3O35492 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk3O35492 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Clk3O35492 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Clk3O35492 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clk3O35492 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.32■□□□□ 0.2
Clk3O35492 Gm37856-201ENSMUST00000191634 999 ntBASIC16.32■□□□□ 0.2
Clk3O35492 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk3O35492 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk3O35492 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Clk3O35492 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clk3O35492 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clk3O35492 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clk3O35492 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.32■□□□□ 0.2
Clk3O35492 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clk3O35492 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.31■□□□□ 0.2
Clk3O35492 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Gm12527-201ENSMUST00000117967 564 ntBASIC16.31■□□□□ 0.2
Clk3O35492 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Clk3O35492 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Gm27275-201ENSMUST00000184318 272 ntBASIC16.31■□□□□ 0.2
Clk3O35492 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.31■□□□□ 0.2
Clk3O35492 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Clk3O35492 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clk3O35492 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Clk3O35492 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Clk3O35492 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clk3O35492 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Clk3O35492 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.3■□□□□ 0.2
Clk3O35492 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.3■□□□□ 0.2
Clk3O35492 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Clk3O35492 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Clk3O35492 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clk3O35492 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Clk3O35492 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Clk3O35492 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Clk3O35492 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clk3O35492 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.29■□□□□ 0.2
Clk3O35492 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.29■□□□□ 0.2
Clk3O35492 Gm10418-201ENSMUST00000100943 576 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms