Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf2O35218 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cpsf2O35218 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf2O35218 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf2O35218 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cpsf2O35218 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.35■□□□□ 0.53
Cpsf2O35218 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf2O35218 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf2O35218 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.35■□□□□ 0.53
Cpsf2O35218 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cpsf2O35218 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.35■□□□□ 0.53
Cpsf2O35218 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cpsf2O35218 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf2O35218 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.35■□□□□ 0.53
Cpsf2O35218 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf2O35218 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cpsf2O35218 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cpsf2O35218 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.34■□□□□ 0.53
Cpsf2O35218 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cpsf2O35218 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cpsf2O35218 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cpsf2O35218 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf2O35218 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf2O35218 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf2O35218 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf2O35218 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf2O35218 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf2O35218 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf2O35218 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf2O35218 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Cpsf2O35218 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Cpsf2O35218 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cpsf2O35218 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.33■□□□□ 0.52
Cpsf2O35218 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.33■□□□□ 0.52
Cpsf2O35218 Gm6576-201ENSMUST00000169678 883 ntBASIC18.33■□□□□ 0.52
Cpsf2O35218 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.33■□□□□ 0.52
Cpsf2O35218 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf2O35218 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf2O35218 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf2O35218 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf2O35218 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf2O35218 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf2O35218 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf2O35218 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf2O35218 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf2O35218 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf2O35218 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf2O35218 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf2O35218 Gm11643-201ENSMUST00000119578 864 ntBASIC18.32■□□□□ 0.52
Cpsf2O35218 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cpsf2O35218 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf2O35218 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cpsf2O35218 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cpsf2O35218 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf2O35218 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cpsf2O35218 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf2O35218 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.31■□□□□ 0.52
Cpsf2O35218 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf2O35218 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.31■□□□□ 0.52
Cpsf2O35218 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf2O35218 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.31■□□□□ 0.52
Cpsf2O35218 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf2O35218 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf2O35218 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf2O35218 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf2O35218 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf2O35218 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf2O35218 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf2O35218 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf2O35218 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Cpsf2O35218 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf2O35218 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf2O35218 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.3■□□□□ 0.52
Cpsf2O35218 Gm27275-201ENSMUST00000184318 272 ntBASIC18.3■□□□□ 0.52
Cpsf2O35218 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf2O35218 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cpsf2O35218 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms