Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.31■□□□□ 0.04
OtpO09113 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OtpO09113 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Gm10418-201ENSMUST00000100943 576 ntBASIC15.3■□□□□ 0.04
OtpO09113 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.3■□□□□ 0.04
OtpO09113 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Gm10653-202ENSMUST00000139570 835 ntBASIC15.3■□□□□ 0.04
OtpO09113 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.3■□□□□ 0.04
OtpO09113 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.3■□□□□ 0.04
OtpO09113 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.3■□□□□ 0.04
OtpO09113 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
OtpO09113 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
OtpO09113 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OtpO09113 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
OtpO09113 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.29■□□□□ 0.04
OtpO09113 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
OtpO09113 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
OtpO09113 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.29■□□□□ 0.04
OtpO09113 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.29■□□□□ 0.04
OtpO09113 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
OtpO09113 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OtpO09113 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
OtpO09113 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Gm37292-201ENSMUST00000192062 758 ntBASIC15.28■□□□□ 0.04
OtpO09113 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.28■□□□□ 0.04
OtpO09113 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.28■□□□□ 0.04
OtpO09113 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.28■□□□□ 0.04
OtpO09113 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.28■□□□□ 0.04
OtpO09113 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
OtpO09113 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
OtpO09113 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtpO09113 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
OtpO09113 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.27■□□□□ 0.04
OtpO09113 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtpO09113 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtpO09113 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.27■□□□□ 0.04
OtpO09113 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtpO09113 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
OtpO09113 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtpO09113 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
OtpO09113 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.27■□□□□ 0.04
OtpO09113 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.27■□□□□ 0.04
OtpO09113 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.27■□□□□ 0.04
OtpO09113 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtpO09113 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
OtpO09113 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtpO09113 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtpO09113 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
OtpO09113 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtpO09113 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtpO09113 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OtpO09113 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms