Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Pkd1O08852 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pkd1O08852 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 Rprl3-201ENSMUST00000157400 290 ntBASIC10.89□□□□□ -0.67
Pkd1O08852 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.89□□□□□ -0.67
Pkd1O08852 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.89□□□□□ -0.67
Pkd1O08852 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC10.89□□□□□ -0.67
Pkd1O08852 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.89□□□□□ -0.67
Pkd1O08852 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.89□□□□□ -0.67
Pkd1O08852 Gm43231-201ENSMUST00000202960 2258 ntBASIC10.89□□□□□ -0.67
Pkd1O08852 Phf7-203ENSMUST00000226565 1971 ntBASIC10.89□□□□□ -0.67
Pkd1O08852 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 Gm43272-201ENSMUST00000200599 1584 ntBASIC10.89□□□□□ -0.67
Pkd1O08852 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Pkd1O08852 Gm13418-201ENSMUST00000119097 944 ntBASIC10.89□□□□□ -0.67
Pkd1O08852 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pkd1O08852 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Idnk-204ENSMUST00000226010 1898 ntBASIC10.88□□□□□ -0.67
Pkd1O08852 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.88□□□□□ -0.67
Pkd1O08852 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.88□□□□□ -0.67
Pkd1O08852 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC10.88□□□□□ -0.67
Pkd1O08852 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC10.88□□□□□ -0.67
Pkd1O08852 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Pkd1O08852 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC10.88□□□□□ -0.67
Pkd1O08852 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pkd1O08852 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC10.87□□□□□ -0.67
Pkd1O08852 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.87□□□□□ -0.67
Pkd1O08852 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pkd1O08852 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.87□□□□□ -0.67
Pkd1O08852 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Pkd1O08852 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.87□□□□□ -0.67
Pkd1O08852 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.87□□□□□ -0.67
Pkd1O08852 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.87□□□□□ -0.67
Pkd1O08852 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
Pkd1O08852 Wnt10b-204ENSMUST00000226655 1807 ntBASIC10.87□□□□□ -0.67
Pkd1O08852 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pkd1O08852 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pkd1O08852 Mir8112-201ENSMUST00000184382 131 ntBASIC10.87□□□□□ -0.67
Pkd1O08852 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pkd1O08852 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pkd1O08852 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pkd1O08852 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pkd1O08852 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pkd1O08852 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pkd1O08852 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pkd1O08852 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pkd1O08852 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Pkd1O08852 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Pkd1O08852 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pkd1O08852 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.86□□□□□ -0.67
Pkd1O08852 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pkd1O08852 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pkd1O08852 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.86□□□□□ -0.67
Pkd1O08852 Fst-202ENSMUST00000223640 2612 ntBASIC10.86□□□□□ -0.67
Pkd1O08852 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms