Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ercc2O08811 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Gm37055-201ENSMUST00000191866 133 ntBASIC17.56■□□□□ 0.4
Ercc2O08811 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.56■□□□□ 0.4
Ercc2O08811 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.56■□□□□ 0.4
Ercc2O08811 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Gm5417-201ENSMUST00000079706 384 ntBASIC17.56■□□□□ 0.4
Ercc2O08811 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ercc2O08811 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ercc2O08811 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.56■□□□□ 0.4
Ercc2O08811 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.55■□□□□ 0.4
Ercc2O08811 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ercc2O08811 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ercc2O08811 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.55■□□□□ 0.4
Ercc2O08811 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ercc2O08811 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
Ercc2O08811 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.54■□□□□ 0.4
Ercc2O08811 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ercc2O08811 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ercc2O08811 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc2O08811 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc2O08811 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Ercc2O08811 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.53■□□□□ 0.4
Ercc2O08811 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ercc2O08811 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.53■□□□□ 0.4
Ercc2O08811 Gm10252-201ENSMUST00000209541 832 ntBASIC17.53■□□□□ 0.4
Ercc2O08811 Gm7791-201ENSMUST00000219066 539 ntBASIC17.53■□□□□ 0.4
Ercc2O08811 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc2O08811 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc2O08811 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ercc2O08811 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc2O08811 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.53■□□□□ 0.4
Ercc2O08811 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ercc2O08811 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ercc2O08811 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ercc2O08811 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ercc2O08811 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ercc2O08811 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ercc2O08811 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ercc2O08811 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.52■□□□□ 0.4
Ercc2O08811 Il3ra-202ENSMUST00000223589 738 ntBASIC17.52■□□□□ 0.4
Ercc2O08811 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc2O08811 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms