Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Gm37856-201ENSMUST00000191634 999 ntBASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Gm10517-202ENSMUST00000192970 758 ntBASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfrsf11bO08712 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Tnfrsf11bO08712 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Gm12527-201ENSMUST00000117967 564 ntBASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Trmt13-210ENSMUST00000198454 880 ntBASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfrsf11bO08712 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Gm43183-201ENSMUST00000200632 547 ntBASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfrsf11bO08712 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfrsf11bO08712 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfrsf11bO08712 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfrsf11bO08712 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfrsf11bO08712 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms