Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Raet1cO08604 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.32■□□□□ 0.04
Raet1cO08604 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1cO08604 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1cO08604 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1cO08604 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1cO08604 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1cO08604 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1cO08604 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1cO08604 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1cO08604 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1cO08604 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1cO08604 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.31■□□□□ 0.04
Raet1cO08604 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.31■□□□□ 0.04
Raet1cO08604 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Raet1cO08604 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Raet1cO08604 Gm27011-201ENSMUST00000182352 972 ntBASIC15.31■□□□□ 0.04
Raet1cO08604 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.31■□□□□ 0.04
Raet1cO08604 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1cO08604 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.31■□□□□ 0.04
Raet1cO08604 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1cO08604 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1cO08604 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Raet1cO08604 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1cO08604 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Raet1cO08604 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.3■□□□□ 0.04
Raet1cO08604 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.3■□□□□ 0.04
Raet1cO08604 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1cO08604 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Raet1cO08604 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Raet1cO08604 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1cO08604 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.3■□□□□ 0.04
Raet1cO08604 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Raet1cO08604 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1cO08604 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.3■□□□□ 0.04
Raet1cO08604 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1cO08604 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Raet1cO08604 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Raet1cO08604 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1cO08604 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1cO08604 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Raet1cO08604 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Raet1cO08604 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Raet1cO08604 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Raet1cO08604 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Raet1cO08604 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.29■□□□□ 0.04
Raet1cO08604 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Raet1cO08604 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.29■□□□□ 0.04
Raet1cO08604 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.29■□□□□ 0.04
Raet1cO08604 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Raet1cO08604 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Raet1cO08604 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Raet1cO08604 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Raet1cO08604 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1cO08604 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1cO08604 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Raet1cO08604 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Raet1cO08604 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1cO08604 Gm24841-201ENSMUST00000158676 357 ntBASIC15.28■□□□□ 0.04
Raet1cO08604 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1cO08604 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1cO08604 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1cO08604 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1cO08604 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1cO08604 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Raet1cO08604 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms