Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
B020004C17RikJ3QP07 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
B020004C17RikJ3QP07 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
B020004C17RikJ3QP07 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
B020004C17RikJ3QP07 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
B020004C17RikJ3QP07 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Gm13312-201ENSMUST00000119631 718 ntBASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Gm11452-201ENSMUST00000122376 690 ntBASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
B020004C17RikJ3QP07 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Rprl3-201ENSMUST00000157400 290 ntBASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Gm5867-201ENSMUST00000063197 592 ntBASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
B020004C17RikJ3QP07 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
B020004C17RikJ3QP07 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
B020004C17RikJ3QP07 Iqck-206ENSMUST00000208658 2891 ntBASIC19.14■□□□□ 0.65
B020004C17RikJ3QP07 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
B020004C17RikJ3QP07 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
B020004C17RikJ3QP07 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.14■□□□□ 0.65
B020004C17RikJ3QP07 Rps4l-201ENSMUST00000071745 943 ntBASIC19.14■□□□□ 0.65
B020004C17RikJ3QP07 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.14■□□□□ 0.65
B020004C17RikJ3QP07 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
B020004C17RikJ3QP07 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
B020004C17RikJ3QP07 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
B020004C17RikJ3QP07 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
B020004C17RikJ3QP07 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Gm12644-201ENSMUST00000119935 606 ntBASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Gm18421-201ENSMUST00000204122 625 ntBASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
B020004C17RikJ3QP07 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
B020004C17RikJ3QP07 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms