Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim34bJ3QNR8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Trim34bJ3QNR8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Trim34bJ3QNR8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34bJ3QNR8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34bJ3QNR8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34bJ3QNR8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34bJ3QNR8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34bJ3QNR8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34bJ3QNR8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim34bJ3QNR8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.99■□□□□ 0.95
Trim34bJ3QNR8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Gm6623-201ENSMUST00000173570 544 ntBASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim34bJ3QNR8 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Gm27000-201ENSMUST00000182943 842 ntBASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim34bJ3QNR8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Mir770-201ENSMUST00000103252 94 ntBASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trim34bJ3QNR8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34bJ3QNR8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.95■□□□□ 0.94
Trim34bJ3QNR8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34bJ3QNR8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trim34bJ3QNR8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34bJ3QNR8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34bJ3QNR8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Trim34bJ3QNR8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34bJ3QNR8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34bJ3QNR8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim34bJ3QNR8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim34bJ3QNR8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms