Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC31.22■■■□□ 2.59
Ccdc180J3QNE4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Gm43347-201ENSMUST00000200226 580 ntBASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Gm44832-201ENSMUST00000208849 2303 ntBASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ccdc180J3QNE4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ccdc180J3QNE4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ccdc180J3QNE4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ccdc180J3QNE4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.59
Ccdc180J3QNE4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC31.2■■■□□ 2.59
Ccdc180J3QNE4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ccdc180J3QNE4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC31.2■■■□□ 2.58
Ccdc180J3QNE4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Ccdc180J3QNE4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Ccdc180J3QNE4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Ccdc180J3QNE4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Ccdc180J3QNE4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Rps4l-201ENSMUST00000071745 943 ntBASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ccdc180J3QNE4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc180J3QNE4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc180J3QNE4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc180J3QNE4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc180J3QNE4 Fst-202ENSMUST00000223640 2612 ntBASIC31.17■■■□□ 2.58
Ccdc180J3QNE4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC31.17■■■□□ 2.58
Ccdc180J3QNE4 Rprl3-201ENSMUST00000157400 290 ntBASIC31.17■■■□□ 2.58
Ccdc180J3QNE4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc180J3QNE4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc180J3QNE4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Ccdc180J3QNE4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Gm29707-201ENSMUST00000196325 491 ntBASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Gm5712-201ENSMUST00000199748 1043 ntBASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Ccdc180J3QNE4 Dmtn-207ENSMUST00000228001 2437 ntBASIC31.15■■■□□ 2.58
Ccdc180J3QNE4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
Ccdc180J3QNE4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Ccdc180J3QNE4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ccdc180J3QNE4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ccdc180J3QNE4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC31.15■■■□□ 2.58
Ccdc180J3QNE4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC31.15■■■□□ 2.58
Ccdc180J3QNE4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
Ccdc180J3QNE4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc180J3QNE4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC31.14■■■□□ 2.58
Ccdc180J3QNE4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC31.14■■■□□ 2.58
Ccdc180J3QNE4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc180J3QNE4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc180J3QNE4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ccdc180J3QNE4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ccdc180J3QNE4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms