Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 Gm22240-201ENSMUST00000175225 82 ntBASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Sgo2bJ3QMK1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Gm24841-201ENSMUST00000158676 357 ntBASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sgo2bJ3QMK1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sgo2bJ3QMK1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sgo2bJ3QMK1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sgo2bJ3QMK1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sgo2bJ3QMK1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sgo2bJ3QMK1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Gm13168-201ENSMUST00000121771 632 ntBASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sgo2bJ3QMK1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sgo2bJ3QMK1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms