Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm44486-201ENSMUST00000198508 138 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44454-201ENSMUST00000198541 138 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44314-201ENSMUST00000199263 138 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44394-201ENSMUST00000199558 138 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44484-201ENSMUST00000199873 138 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44466-201ENSMUST00000200264 138 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44359-201ENSMUST00000200671 138 ntBASIC16.29■□□□□ 0.2
Colca2F8VPY8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Colca2F8VPY8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Colca2F8VPY8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.28■□□□□ 0.2
Colca2F8VPY8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Gm15165-201ENSMUST00000118140 502 ntBASIC16.28■□□□□ 0.2
Colca2F8VPY8 Gm12350-201ENSMUST00000121208 462 ntBASIC16.28■□□□□ 0.2
Colca2F8VPY8 Gm18421-201ENSMUST00000204122 625 ntBASIC16.28■□□□□ 0.2
Colca2F8VPY8 Gm10060-201ENSMUST00000212002 111 ntBASIC16.28■□□□□ 0.2
Colca2F8VPY8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Colca2F8VPY8 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.27■□□□□ 0.2
Colca2F8VPY8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Colca2F8VPY8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Colca2F8VPY8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Colca2F8VPY8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Colca2F8VPY8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Colca2F8VPY8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Gm27867-201ENSMUST00000184778 125 ntBASIC16.26■□□□□ 0.19
Colca2F8VPY8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.26■□□□□ 0.19
Colca2F8VPY8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Colca2F8VPY8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Colca2F8VPY8 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.25■□□□□ 0.19
Colca2F8VPY8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Colca2F8VPY8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Colca2F8VPY8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Colca2F8VPY8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.25■□□□□ 0.19
Colca2F8VPY8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Colca2F8VPY8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.25■□□□□ 0.19
Colca2F8VPY8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.25■□□□□ 0.19
Colca2F8VPY8 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.25■□□□□ 0.19
Colca2F8VPY8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.24■□□□□ 0.19
Colca2F8VPY8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Colca2F8VPY8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms