Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpsf4lE9Q2N0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Il3ra-202ENSMUST00000223589 738 ntBASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cpsf4lE9Q2N0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cpsf4lE9Q2N0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.52□□□□□ -0.08
Cpsf4lE9Q2N0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4lE9Q2N0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4lE9Q2N0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Cpsf4lE9Q2N0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4lE9Q2N0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cpsf4lE9Q2N0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cpsf4lE9Q2N0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Gm30025-201ENSMUST00000218555 728 ntBASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Cpsf4lE9Q2N0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Gm27463-201ENSMUST00000183569 57 ntBASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cpsf4lE9Q2N0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms