Protein–RNA interactions for Protein: D3Z3N4

Hnrnph3, Heterogeneous nuclear ribonucleoprotein H3, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnrnph3D3Z3N4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Hnrnph3D3Z3N4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hnrnph3D3Z3N4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hnrnph3D3Z3N4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hnrnph3D3Z3N4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hnrnph3D3Z3N4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hnrnph3D3Z3N4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnrnph3D3Z3N4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnrnph3D3Z3N4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hnrnph3D3Z3N4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hnrnph3D3Z3N4 Gm12382-201ENSMUST00000122005 922 ntBASIC18.27■□□□□ 0.52
Hnrnph3D3Z3N4 Gm17661-201ENSMUST00000170317 270 ntBASIC18.27■□□□□ 0.52
Hnrnph3D3Z3N4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hnrnph3D3Z3N4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Hnrnph3D3Z3N4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hnrnph3D3Z3N4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Hnrnph3D3Z3N4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hnrnph3D3Z3N4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hnrnph3D3Z3N4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Gm18666-201ENSMUST00000190039 958 ntBASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hnrnph3D3Z3N4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Gm43183-201ENSMUST00000200632 547 ntBASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hnrnph3D3Z3N4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms