Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Gm2651-201ENSMUST00000203560 838 ntBASIC15.32■□□□□ 0.04
Shank1D3YZU1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.32■□□□□ 0.04
Shank1D3YZU1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.32■□□□□ 0.04
Shank1D3YZU1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Shank1D3YZU1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.31■□□□□ 0.04
Shank1D3YZU1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.31■□□□□ 0.04
Shank1D3YZU1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.31■□□□□ 0.04
Shank1D3YZU1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Shank1D3YZU1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.3■□□□□ 0.04
Shank1D3YZU1 Gm18206-201ENSMUST00000207027 926 ntBASIC15.3■□□□□ 0.04
Shank1D3YZU1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.3■□□□□ 0.04
Shank1D3YZU1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shank1D3YZU1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.29■□□□□ 0.04
Shank1D3YZU1 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.29■□□□□ 0.04
Shank1D3YZU1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.29■□□□□ 0.04
Shank1D3YZU1 BC021767-201ENSMUST00000126387 1716 ntBASIC15.29■□□□□ 0.04
Shank1D3YZU1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.29■□□□□ 0.04
Shank1D3YZU1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.29■□□□□ 0.04
Shank1D3YZU1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Shank1D3YZU1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Gm11452-201ENSMUST00000122376 690 ntBASIC15.28■□□□□ 0.04
Shank1D3YZU1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Gm37935-201ENSMUST00000192012 982 ntBASIC15.28■□□□□ 0.04
Shank1D3YZU1 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shank1D3YZU1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms