Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn2B2RVW2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn2B2RVW2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn2B2RVW2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clrn2B2RVW2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Iqck-206ENSMUST00000208658 2891 ntBASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clrn2B2RVW2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Gm11336-201ENSMUST00000118168 334 ntBASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Clrn2B2RVW2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clrn2B2RVW2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.83■□□□□ 0.77
Clrn2B2RVW2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Birc2-201ENSMUST00000054878 378 ntBASIC19.83■□□□□ 0.77
Clrn2B2RVW2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn2B2RVW2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn2B2RVW2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn2B2RVW2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn2B2RVW2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn2B2RVW2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn2B2RVW2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn2B2RVW2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn2B2RVW2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clrn2B2RVW2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn2B2RVW2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn2B2RVW2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn2B2RVW2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.82■□□□□ 0.76
Clrn2B2RVW2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn2B2RVW2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.82■□□□□ 0.76
Clrn2B2RVW2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clrn2B2RVW2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn2B2RVW2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn2B2RVW2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn2B2RVW2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.81■□□□□ 0.76
Clrn2B2RVW2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Clrn2B2RVW2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.81■□□□□ 0.76
Clrn2B2RVW2 Gm5864-201ENSMUST00000202263 970 ntBASIC19.81■□□□□ 0.76
Clrn2B2RVW2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn2B2RVW2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn2B2RVW2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clrn2B2RVW2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clrn2B2RVW2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms