Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp42B2RQC2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp42B2RQC2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.06■□□□□ 0.8
Usp42B2RQC2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp42B2RQC2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp42B2RQC2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Usp42B2RQC2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.06■□□□□ 0.8
Usp42B2RQC2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp42B2RQC2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.05■□□□□ 0.8
Usp42B2RQC2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp42B2RQC2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp42B2RQC2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.04■□□□□ 0.8
Usp42B2RQC2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Usp42B2RQC2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp42B2RQC2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.04■□□□□ 0.8
Usp42B2RQC2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Usp42B2RQC2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp42B2RQC2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Usp42B2RQC2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp42B2RQC2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Usp42B2RQC2 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.03■□□□□ 0.8
Usp42B2RQC2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Gm7370-201ENSMUST00000219471 767 ntBASIC20.03■□□□□ 0.8
Usp42B2RQC2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp42B2RQC2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Gm7889-201ENSMUST00000185591 958 ntBASIC20.02■□□□□ 0.8
Usp42B2RQC2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp42B2RQC2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp42B2RQC2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp42B2RQC2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp42B2RQC2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.01■□□□□ 0.79
Usp42B2RQC2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Usp42B2RQC2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.01■□□□□ 0.79
Usp42B2RQC2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Usp42B2RQC2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp42B2RQC2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Usp42B2RQC2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Usp42B2RQC2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
Usp42B2RQC2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Usp42B2RQC2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.01■□□□□ 0.79
Usp42B2RQC2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Usp42B2RQC2 Gm18958-201ENSMUST00000174258 762 ntBASIC20.01■□□□□ 0.79
Usp42B2RQC2 Gm2274-201ENSMUST00000184539 609 ntBASIC20.01■□□□□ 0.79
Usp42B2RQC2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.01■□□□□ 0.79
Usp42B2RQC2 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms