Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col4a6B1AVK5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.67■□□□□ 0.42
Col4a6B1AVK5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Rprl3-201ENSMUST00000157400 290 ntBASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.66■□□□□ 0.42
Col4a6B1AVK5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col4a6B1AVK5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Gm27867-201ENSMUST00000184778 125 ntBASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Gm18206-201ENSMUST00000207027 926 ntBASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.65■□□□□ 0.42
Col4a6B1AVK5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a6B1AVK5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a6B1AVK5 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a6B1AVK5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.64■□□□□ 0.42
Col4a6B1AVK5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a6B1AVK5 Gm37935-201ENSMUST00000192012 982 ntBASIC17.64■□□□□ 0.42
Col4a6B1AVK5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
Col4a6B1AVK5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col4a6B1AVK5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Iqck-206ENSMUST00000208658 2891 ntBASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a6B1AVK5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.63■□□□□ 0.41
Col4a6B1AVK5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.63■□□□□ 0.41
Col4a6B1AVK5 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Grk6-206ENSMUST00000224995 2971 ntBASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a6B1AVK5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a6B1AVK5 Mir5126-201ENSMUST00000175513 77 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms