Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sh2d4bA6X942 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Tgds-204ENSMUST00000228543 1594 ntBASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sh2d4bA6X942 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Gm16061-201ENSMUST00000122167 857 ntBASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sh2d4bA6X942 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sh2d4bA6X942 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh2d4bA6X942 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh2d4bA6X942 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh2d4bA6X942 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.33■□□□□ 0.53
Sh2d4bA6X942 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh2d4bA6X942 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.33■□□□□ 0.53
Sh2d4bA6X942 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Mir2861-201ENSMUST00000175539 82 ntBASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Gm27704-201ENSMUST00000185094 107 ntBASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sh2d4bA6X942 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4bA6X942 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Gm7461-201ENSMUST00000058918 827 ntBASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.32■□□□□ 0.52
Sh2d4bA6X942 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms