Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.42□□□□□ -0.1
Col6a4A2AX52 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col6a4A2AX52 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.41□□□□□ -0.1
Col6a4A2AX52 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.4□□□□□ -0.1
Col6a4A2AX52 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col6a4A2AX52 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Col6a4A2AX52 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.4□□□□□ -0.11
Col6a4A2AX52 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.4□□□□□ -0.11
Col6a4A2AX52 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Col6a4A2AX52 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Gm11336-201ENSMUST00000118168 334 ntBASIC14.39□□□□□ -0.11
Col6a4A2AX52 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col6a4A2AX52 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.38□□□□□ -0.11
Col6a4A2AX52 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col6a4A2AX52 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms