Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn1aA2APX8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn1aA2APX8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn1aA2APX8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn1aA2APX8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn1aA2APX8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18■□□□□ 0.47
Scn1aA2APX8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn1aA2APX8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn1aA2APX8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn1aA2APX8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18■□□□□ 0.47
Scn1aA2APX8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn1aA2APX8 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn1aA2APX8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Scn1aA2APX8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18■□□□□ 0.47
Scn1aA2APX8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn1aA2APX8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18■□□□□ 0.47
Scn1aA2APX8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18■□□□□ 0.47
Scn1aA2APX8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Phf7-203ENSMUST00000226565 1971 ntBASIC17.99■□□□□ 0.47
Scn1aA2APX8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn1aA2APX8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.99■□□□□ 0.47
Scn1aA2APX8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Gm37722-201ENSMUST00000193757 208 ntBASIC17.98■□□□□ 0.47
Scn1aA2APX8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Gm21559-201ENSMUST00000220638 855 ntBASIC17.98■□□□□ 0.47
Scn1aA2APX8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Gm8587-201ENSMUST00000076538 843 ntBASIC17.98■□□□□ 0.47
Scn1aA2APX8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scn1aA2APX8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn1aA2APX8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn1aA2APX8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn1aA2APX8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.96■□□□□ 0.47
Scn1aA2APX8 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.96■□□□□ 0.47
Scn1aA2APX8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.96■□□□□ 0.47
Scn1aA2APX8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn1aA2APX8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.96■□□□□ 0.47
Scn1aA2APX8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.95■□□□□ 0.46
Scn1aA2APX8 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.95■□□□□ 0.46
Scn1aA2APX8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn1aA2APX8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms