Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm45331-201ENSMUST00000209868 554 ntBASIC9.07□□□□□ -0.96
Ubr4A2AN08 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ubr4A2AN08 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Ubr4A2AN08 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Gm26766-202ENSMUST00000227544 2347 ntBASIC9.06□□□□□ -0.96
Ubr4A2AN08 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC9.06□□□□□ -0.96
Ubr4A2AN08 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Ubr4A2AN08 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.05□□□□□ -0.96
Ubr4A2AN08 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ubr4A2AN08 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ubr4A2AN08 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Golph3-205ENSMUST00000228671 2842 ntBASIC9.05□□□□□ -0.96
Ubr4A2AN08 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Rncr4-201ENSMUST00000194541 2234 ntBASIC9.05□□□□□ -0.96
Ubr4A2AN08 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.05□□□□□ -0.96
Ubr4A2AN08 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ubr4A2AN08 Gm32051-202ENSMUST00000197905 2385 ntBASIC9.05□□□□□ -0.96
Ubr4A2AN08 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC9.04□□□□□ -0.96
Ubr4A2AN08 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC9.04□□□□□ -0.96
Ubr4A2AN08 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC9.04□□□□□ -0.96
Ubr4A2AN08 AC154855.1-201ENSMUST00000227353 1458 ntBASIC9.04□□□□□ -0.96
Ubr4A2AN08 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 AC152827.1-201ENSMUST00000221143 2189 ntBASIC9.04□□□□□ -0.96
Ubr4A2AN08 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Gm38345-201ENSMUST00000192635 1748 ntBASIC9.04□□□□□ -0.96
Ubr4A2AN08 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ubr4A2AN08 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Gm7653-201ENSMUST00000214567 508 ntBASIC9.03□□□□□ -0.96
Ubr4A2AN08 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.03□□□□□ -0.96
Ubr4A2AN08 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC9.03□□□□□ -0.96
Ubr4A2AN08 Gm18062-201ENSMUST00000208020 547 ntBASIC9.03□□□□□ -0.96
Ubr4A2AN08 Gm18055-201ENSMUST00000208254 547 ntBASIC9.03□□□□□ -0.96
Ubr4A2AN08 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ubr4A2AN08 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms