Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc112A0AUP1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc112A0AUP1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc112A0AUP1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.62■□□□□ 0.73
Ccdc112A0AUP1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc112A0AUP1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc112A0AUP1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Gm18025-201ENSMUST00000221733 862 ntBASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc112A0AUP1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc112A0AUP1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc112A0AUP1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc112A0AUP1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc112A0AUP1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.6■□□□□ 0.73
Ccdc112A0AUP1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc112A0AUP1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc112A0AUP1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc112A0AUP1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc112A0AUP1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc112A0AUP1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Gm13216-201ENSMUST00000117145 591 ntBASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc112A0AUP1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ccdc112A0AUP1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc112A0AUP1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc112A0AUP1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc112A0AUP1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc112A0AUP1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc112A0AUP1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc112A0AUP1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.58■□□□□ 0.72
Ccdc112A0AUP1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc112A0AUP1 Gm42545-201ENSMUST00000202755 922 ntBASIC19.58■□□□□ 0.72
Ccdc112A0AUP1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc112A0AUP1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc112A0AUP1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc112A0AUP1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc112A0AUP1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc112A0AUP1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc112A0AUP1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc112A0AUP1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms