Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28729A0A1B0GSW2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28729A0A1B0GSW2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.74■□□□□ 0.27
Gm28729A0A1B0GSW2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28729A0A1B0GSW2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28729A0A1B0GSW2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.74■□□□□ 0.27
Gm28729A0A1B0GSW2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28729A0A1B0GSW2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm28729A0A1B0GSW2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Gm45328-201ENSMUST00000210942 917 ntBASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm28729A0A1B0GSW2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm28729A0A1B0GSW2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Phf7-203ENSMUST00000226565 1971 ntBASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Gm11336-201ENSMUST00000118168 334 ntBASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Gm15794-201ENSMUST00000120182 631 ntBASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm28729A0A1B0GSW2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Gm28729A0A1B0GSW2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm7153-201ENSMUST00000117092 455 ntBASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm28729A0A1B0GSW2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm13186-201ENSMUST00000118031 316 ntBASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm28729A0A1B0GSW2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm28729A0A1B0GSW2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms