Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc194A0A140LIT1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc194A0A140LIT1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc194A0A140LIT1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc194A0A140LIT1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc194A0A140LIT1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc194A0A140LIT1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc194A0A140LIT1 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.08■□□□□ 0.33
Ccdc194A0A140LIT1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccdc194A0A140LIT1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccdc194A0A140LIT1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ccdc194A0A140LIT1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccdc194A0A140LIT1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms