Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Haglr-201ENSMUST00000100000 2085 ntBASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-4A0A0G2JG37 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-4A0A0G2JG37 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-4A0A0G2JG37 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms