Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Atg4a-psA0A0G2JFS9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Gm30025-201ENSMUST00000218555 728 ntBASIC20.83■□□□□ 0.93
Atg4a-psA0A0G2JFS9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.83■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Gm11539-201ENSMUST00000119837 557 ntBASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Gm13436-201ENSMUST00000120418 567 ntBASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Gm27463-201ENSMUST00000183569 57 ntBASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atg4a-psA0A0G2JFS9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms