Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav9n-2A0A0G2JDP3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms