Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav19A0A0B4J1K4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Zfp783-201ENSMUST00000095946 670 ntBASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav19A0A0B4J1K4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav19A0A0B4J1K4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav19A0A0B4J1K4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav19A0A0B4J1K4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav19A0A0B4J1K4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
Trav19A0A0B4J1K4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav19A0A0B4J1K4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav19A0A0B4J1K4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms