Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm27454-201ENSMUST00000185090 204 ntBASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv20A0A0B4J1H5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv20A0A0B4J1H5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Nespas-201ENSMUST00000143738 1083 ntBASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Gm38285-201ENSMUST00000192928 922 ntBASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Gm6420-201ENSMUST00000193885 723 ntBASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv20A0A0B4J1H5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv20A0A0B4J1H5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv20A0A0B4J1H5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms