Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm13148-201ENSMUST00000118892 745 ntBASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm4968-201ENSMUST00000071458 858 ntBASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trbv16A0A0B4J1H3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm15375-201ENSMUST00000119510 849 ntBASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm6576-201ENSMUST00000169678 883 ntBASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm18284-201ENSMUST00000172604 624 ntBASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm42569-201ENSMUST00000200539 472 ntBASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trbv16A0A0B4J1H3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm5408-201ENSMUST00000197998 747 ntBASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Mtag2-201ENSMUST00000058665 714 ntBASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trbv16A0A0B4J1H3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm26571-201ENSMUST00000181399 666 ntBASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Gm2559-201ENSMUST00000201323 363 ntBASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.41□□□□□ -0.42
Trbv16A0A0B4J1H3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms