Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm13474-201ENSMUST00000122466 815 ntBASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm18958-201ENSMUST00000174258 762 ntBASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Mir6982-201ENSMUST00000184354 68 ntBASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm43799-201ENSMUST00000201845 579 ntBASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.13■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm16061-201ENSMUST00000122167 857 ntBASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm15565-201ENSMUST00000118890 427 ntBASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm7370-201ENSMUST00000219471 767 ntBASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trbv12-1A0A0B4J1H0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms