Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Flg-201ENSMUST00000050758 1488 ntBASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm10849-201ENSMUST00000100397 618 ntBASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm13401-201ENSMUST00000117074 291 ntBASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm37179-201ENSMUST00000194862 823 ntBASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Gm44549-201ENSMUST00000208351 577 ntBASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1aA0A0A6YYP6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1aA0A0A6YYP6 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms