Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Olfr129-201ENSMUST00000122318 993 ntBASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Mzt1-203ENSMUST00000227948 952 ntBASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ighv3-4A0A0A6YXF1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.18□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ighv3-4A0A0A6YXF1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms