Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-59A0A0A6YXE0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.11□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ighv1-59A0A0A6YXE0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.11□□□□□ -0.47
Ighv1-59A0A0A6YXE0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms