Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav6-4A0A075B6B4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav6-4A0A075B6B4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Gm37025-201ENSMUST00000195159 829 ntBASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav6-4A0A075B6B4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-4A0A075B6B4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-4A0A075B6B4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-4A0A075B6B4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-4A0A075B6B4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-4A0A075B6B4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-4A0A075B6B4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav6-4A0A075B6B4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Odf3b-204ENSMUST00000227834 930 ntBASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav6-4A0A075B6B4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6-4A0A075B6B4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms