Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.31□□□□□ -0.28
Trav16A0A075B653 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.31□□□□□ -0.28
Trav16A0A075B653 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav16A0A075B653 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.3□□□□□ -0.28
Trav16A0A075B653 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav16A0A075B653 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav16A0A075B653 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.28□□□□□ -0.28
Trav16A0A075B653 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trav16A0A075B653 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav16A0A075B653 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav16A0A075B653 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav16A0A075B653 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Trav16A0A075B653 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav16A0A075B653 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav16A0A075B653 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav16A0A075B653 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav16A0A075B653 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav16A0A075B653 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav16A0A075B653 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms