Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav8-1A0A075B641 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Gm7160-202ENSMUST00000188519 1027 ntBASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav8-1A0A075B641 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav8-1A0A075B641 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Spcs1-204ENSMUST00000226782 949 ntBASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav8-1A0A075B641 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav8-1A0A075B641 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Trav8-1A0A075B641 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms