Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-7-dv9A0A075B639 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gm24841-201ENSMUST00000158676 357 ntBASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-7-dv9A0A075B639 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Trav6-7-dv9A0A075B639 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-7-dv9A0A075B639 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-7-dv9A0A075B639 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav6-7-dv9A0A075B639 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-7-dv9A0A075B639 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-7-dv9A0A075B639 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav6-7-dv9A0A075B639 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-7-dv9A0A075B639 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-7-dv9A0A075B639 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-7-dv9A0A075B639 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Trav6-7-dv9A0A075B639 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.21■□□□□ 0.02
Trav6-7-dv9A0A075B639 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.21■□□□□ 0.02
Trav6-7-dv9A0A075B639 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav6-7-dv9A0A075B639 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-7-dv9A0A075B639 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gm20760-201ENSMUST00000179197 648 ntBASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-7-dv9A0A075B639 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Gm37025-201ENSMUST00000195159 829 ntBASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-7-dv9A0A075B639 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6-7-dv9A0A075B639 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms