Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8n-2A0A075B633 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Olfr129-201ENSMUST00000122318 993 ntBASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8n-2A0A075B633 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav8n-2A0A075B633 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.71■□□□□ 0.1
Trav8n-2A0A075B633 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Trav8n-2A0A075B633 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav8n-2A0A075B633 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8n-2A0A075B633 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Birc2-201ENSMUST00000054878 378 ntBASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8n-2A0A075B633 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Gm34391-201ENSMUST00000203706 907 ntBASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Fst-202ENSMUST00000223640 2612 ntBASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav8n-2A0A075B633 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8n-2A0A075B633 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav8n-2A0A075B633 Gm11336-201ENSMUST00000118168 334 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms