Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Mir1668-201ENSMUST00000184114 107 ntBASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-1A0A075B5Z7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm22697-201ENSMUST00000175194 63 ntBASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm7370-201ENSMUST00000219471 767 ntBASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm18032-201ENSMUST00000222541 538 ntBASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-1A0A075B5Z7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm27389-201ENSMUST00000183622 195 ntBASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-1A0A075B5Z7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-1A0A075B5Z7 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms