Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm20674-201ENSMUST00000177452 369 ntBASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Gm22308-201ENSMUST00000177609 107 ntBASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Gm9687-201ENSMUST00000189312 602 ntBASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Gm29657-201ENSMUST00000189807 342 ntBASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Gm25078-201ENSMUST00000082530 107 ntBASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Gm25698-201ENSMUST00000082897 107 ntBASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Gm25140-201ENSMUST00000083254 140 ntBASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Prpf40aQ9R1C7 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Gm13541-201ENSMUST00000119519 283 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Gm22514-201ENSMUST00000122547 308 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Gm15905-201ENSMUST00000137042 298 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Gm25384-201ENSMUST00000157807 105 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Gm37636-201ENSMUST00000193583 359 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 AC160134.1-201ENSMUST00000213450 551 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 CT485612.4-201ENSMUST00000223405 250 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Mir32-201ENSMUST00000083610 70 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Gm7135-202ENSMUST00000191257 1905 ntBASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Prpf40aQ9R1C7 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm23594-201ENSMUST00000104307 134 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm11366-201ENSMUST00000119279 429 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm15162-201ENSMUST00000119325 283 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm12512-201ENSMUST00000119620 217 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm13581-201ENSMUST00000120675 278 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm13092-201ENSMUST00000136346 260 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm16218-201ENSMUST00000155424 388 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm26287-201ENSMUST00000158887 81 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm20428-201ENSMUST00000174365 283 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm26928-201ENSMUST00000182674 572 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm19123-201ENSMUST00000190716 651 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm7182-201ENSMUST00000193351 732 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 AC155715.1-201ENSMUST00000213575 463 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 AC159709.1-201ENSMUST00000220445 349 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Snora52-201ENSMUST00000082732 137 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.06□□□□□ -1.6
Prpf40aQ9R1C7 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm15313-201ENSMUST00000119179 282 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Defa-ps8-201ENSMUST00000120972 279 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm26362-201ENSMUST00000158865 315 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm24976-201ENSMUST00000158972 135 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm22118-201ENSMUST00000175593 171 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Mir7022-201ENSMUST00000183749 61 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm28755-201ENSMUST00000185773 199 ntBASIC5.05□□□□□ -1.6
Prpf40aQ9R1C7 Gm3145-201ENSMUST00000188584 220 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms