Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm11693-201ENSMUST00000119625 565 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm22447-201ENSMUST00000158155 92 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm26318-201ENSMUST00000176507 96 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm22308-201ENSMUST00000177609 107 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm27476-201ENSMUST00000183366 104 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Mir6416-201ENSMUST00000183664 117 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Mir7235-201ENSMUST00000183796 56 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm7468-201ENSMUST00000203900 652 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm5002-201ENSMUST00000207145 223 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm18213-201ENSMUST00000207850 178 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.45□□□□□ -1.7
Trim39Q9ESN2 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Snord82-201ENSMUST00000082889 70 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm26204-201ENSMUST00000082906 107 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim39Q9ESN2 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm14304-201ENSMUST00000117272 446 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm14714-201ENSMUST00000119743 439 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm24371-201ENSMUST00000122662 267 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm13092-201ENSMUST00000136346 260 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm25967-201ENSMUST00000157168 147 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm23956-201ENSMUST00000157211 119 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm25220-201ENSMUST00000157546 95 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm22766-201ENSMUST00000158372 99 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm24552-201ENSMUST00000158646 103 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm24084-201ENSMUST00000175173 137 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Mir5098-201ENSMUST00000175320 82 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm24264-201ENSMUST00000179835 94 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm27543-201ENSMUST00000183562 177 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm5329-201ENSMUST00000186898 463 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm29454-201ENSMUST00000190805 393 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm29704-201ENSMUST00000196011 253 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm44481-201ENSMUST00000197288 84 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm43712-201ENSMUST00000198020 291 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm44339-201ENSMUST00000200598 84 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm32222-201ENSMUST00000203296 298 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm9512-201ENSMUST00000223112 497 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm25081-201ENSMUST00000082534 108 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm23517-201ENSMUST00000082830 192 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm21035-201ENSMUST00000207867 2608 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim39Q9ESN2 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm24605-201ENSMUST00000104772 96 ntBASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm11065-201ENSMUST00000111462 228 ntBASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm14067-201ENSMUST00000119340 314 ntBASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm16218-201ENSMUST00000155424 388 ntBASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm22321-201ENSMUST00000157152 104 ntBASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm26490-201ENSMUST00000157879 140 ntBASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm27492-201ENSMUST00000185194 187 ntBASIC4.43□□□□□ -1.7
Trim39Q9ESN2 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms