Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm4017-201ENSMUST00000084813 338 ntBASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Nkx2-4Q9EQM3 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm26396-201ENSMUST00000104093 132 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Mir294-201ENSMUST00000104710 84 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm11221-201ENSMUST00000117230 597 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm14537-201ENSMUST00000117464 599 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm23960-201ENSMUST00000157206 131 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm22561-201ENSMUST00000157331 84 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm23024-201ENSMUST00000158770 292 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm22633-201ENSMUST00000179834 107 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm24518-201ENSMUST00000180275 94 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm27783-201ENSMUST00000183534 105 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm28299-201ENSMUST00000189908 339 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm37568-201ENSMUST00000191755 364 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm18956-201ENSMUST00000192857 480 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm44208-201ENSMUST00000205199 421 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm45513-201ENSMUST00000210228 376 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm24037-201ENSMUST00000082871 180 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm25755-201ENSMUST00000083396 107 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.56□□□□□ -1.84
Nkx2-4Q9EQM3 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm11386-201ENSMUST00000117761 347 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm22136-201ENSMUST00000158751 268 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm17919-201ENSMUST00000173344 312 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm25361-201ENSMUST00000179358 76 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm28141-201ENSMUST00000186676 342 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm28500-201ENSMUST00000190286 151 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm32447-201ENSMUST00000194265 697 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Mir7682-201ENSMUST00000198467 58 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm43083-201ENSMUST00000199594 476 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm35857-201ENSMUST00000212739 178 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 AC160962.2-201ENSMUST00000224761 632 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 AC112935.1-201ENSMUST00000227603 250 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm26056-201ENSMUST00000083043 104 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm5670-201ENSMUST00000093546 372 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.55□□□□□ -1.84
Nkx2-4Q9EQM3 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm11784-201ENSMUST00000118568 474 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm24876-201ENSMUST00000158780 92 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm27718-201ENSMUST00000183721 86 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm28339-201ENSMUST00000185845 696 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm29062-201ENSMUST00000186032 694 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm28057-201ENSMUST00000186603 615 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm28896-201ENSMUST00000188609 696 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm28920-201ENSMUST00000189957 699 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm38107-201ENSMUST00000194873 696 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm44256-201ENSMUST00000203304 335 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm5322-201ENSMUST00000206142 699 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm45387-201ENSMUST00000209792 632 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Gm45402-201ENSMUST00000211796 223 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Nkx2-4Q9EQM3 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Nkx2-4Q9EQM3 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms