Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm13729-201ENSMUST00000120328 406 ntBASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Gm13488-201ENSMUST00000120419 179 ntBASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Gm20651-201ENSMUST00000177219 329 ntBASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Gm37421-201ENSMUST00000193088 132 ntBASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Gm4045-201ENSMUST00000204076 310 ntBASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Gm45236-201ENSMUST00000208632 229 ntBASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Gm22247-201ENSMUST00000082476 131 ntBASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Mir32-201ENSMUST00000083610 70 ntBASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
Rpa1Q8VEE4 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Rpa1Q8VEE4 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 n-R5s16-201ENSMUST00000104555 119 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm15058-201ENSMUST00000117689 458 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm13581-201ENSMUST00000120675 278 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm23196-201ENSMUST00000158806 107 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm22118-201ENSMUST00000175593 171 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm25235-201ENSMUST00000179933 107 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm28263-201ENSMUST00000185884 400 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm45380-201ENSMUST00000210465 315 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm9795-201ENSMUST00000062156 693 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Mir215-201ENSMUST00000083628 112 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm25896-201ENSMUST00000083713 136 ntBASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Rpa1Q8VEE4 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Mir541-201ENSMUST00000102097 90 ntBASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Gm23496-201ENSMUST00000157741 248 ntBASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Gm10319-202ENSMUST00000159439 846 ntBASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Gm2607-201ENSMUST00000212389 627 ntBASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 AC153961.2-201ENSMUST00000218877 164 ntBASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 AC173482.5-201ENSMUST00000224181 327 ntBASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Gm7117-201ENSMUST00000071515 387 ntBASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Rpa1Q8VEE4 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Neat1-201ENSMUST00000173672 20771 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Gm15162-201ENSMUST00000119325 283 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Gm25293-201ENSMUST00000122792 285 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Mir6400-201ENSMUST00000184870 92 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Gm34176-201ENSMUST00000192621 474 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Gm37417-201ENSMUST00000195257 454 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Gm2522-201ENSMUST00000204280 322 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Gm24948-201ENSMUST00000082866 207 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Gm24525-201ENSMUST00000082917 151 ntBASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Rpa1Q8VEE4 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Rpa1Q8VEE4 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms